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Showing content from https://www.bioconductor.org/packages/devel/data/annotation/html/chromhmmData.html below:

Bioconductor - chromhmmData (development version)

This is the development version of chromhmmData; for the stable release version, see chromhmmData.

Bioconductor version: Development (3.22)

Annotation files of the formatted genomic annotation for ChromHMM. Three types of text files are included the chromosome sizes, region coordinates and anchors specifying the transcription start and end sites. The package includes data for two versions of the genome of humans and mice.

Author: Mahmoud Ahmed [aut, cre] ORCID: 0000-0002-4377-6541

Maintainer: Mahmoud Ahmed <mahmoud.s.fahmy at students.kasralainy.edu.eg>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("chromhmmData")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chromhmmData")

Follow Installation instructions to use this package in your R session.

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