This is the development version of BSgenome.Hsapiens.UCSC.hg19; for the stable release version, see BSgenome.Hsapiens.UCSC.hg19.
Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor version: Development (3.22)
Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg19, based on GRCh37.p13) and stored in Biostrings objects.
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, entercitation("BSgenome.Hsapiens.UCSC.hg19")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("BSgenome.Hsapiens.UCSC.hg19")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details See More Suggests Linking To Enhances Depends On Me CODEX, SCOPE, traseR, BSgenome.Hsapiens.UCSC.hg19.masked, annotation, sequencing, variants Imports Me appreci8R, cfDNAPro, circRNAprofiler, decompTumor2Sig, epiregulon, HiLDA, katdetectr, methodical, musicatk, RareVariantVis, RCAS, YAPSA, BSgenome.Hsapiens.UCSC.hg19.masked, SATS Suggests Me ATACseqQC, BadRegionFinder, Basic4Cseq, BBCAnalyzer, biovizBase, bnbc, CAGEr, ChIPpeakAnno, chromVAR, CNEr, CNVfilteR, CRISPRseek, customProDB, DAMEfinder, DNAshapeR, EpiCompare, esATAC, FRASER, G4SNVHunter, gcapc, GenomicAlignments, GenomicFeatures, GenVisR, geomeTriD, ggbio, gmapR, GRaNIE, GreyListChIP, GUIDEseq, Gviz, h5vc, HiCDCPlus, InPAS, IntEREst, IsoformSwitchAnalyzeR, karyoploteR, maftools, MEDIPS, MesKit, MethReg, methrix, MinimumDistance, MiRaGE, motifbreakR, motifmatchr, MotifPeeker, motifTestR, MutationalPatterns, ORFik, OrganismDbi, pageRank, pipeFrame, plotgardener, plyranges, ProteoDisco, qsea, R453Plus1Toolbox, REMP, RiboCrypt, RiboProfiling, Rsamtools, RSVSim, rtracklayer, SGSeq, signeR, SigsPack, supersigs, svaNUMT, UMI4Cats, VariantAnnotation, wavClusteR, FDb.FANTOM4.promoters.hg19, FDb.UCSC.snp135common.hg19, FDb.UCSC.snp137common.hg19, SNPlocs.Hsapiens.dbSNP144.GRCh37, SNPlocs.Hsapiens.dbSNP155.GRCh37, XtraSNPlocs.Hsapiens.dbSNP144.GRCh37, sigminer Links To Me Package ArchivesFollow Installation instructions to use this package in your R session.
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