This is the development version of GA4GHshiny; for the stable release version, see GA4GHshiny.
Shiny application for interacting with GA4GH-based data serversBioconductor version: Development (3.22)
GA4GHshiny package provides an easy way to interact with data servers based on Global Alliance for Genomics and Health (GA4GH) genomics API through a Shiny application. It also integrates with Beacon Network.
Author: Welliton Souza [aut, cre], Benilton Carvalho [ctb], Cristiane Rocha [ctb], Elizabeth Borgognoni [ctb]
Maintainer: Welliton Souza <well309 at gmail.com>
Citation (from within R, entercitation("GA4GHshiny")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("GA4GHshiny")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GA4GHshiny")
Details biocViews GUI, Software Version 1.31.0 In Bioconductor since BioC 3.6 (R-3.4) (7.5 years) License GPL-3 Depends GA4GHclient Imports AnnotationDbi, BiocGenerics, dplyr, DT, GenomeInfoDb, openxlsx, GenomicFeatures, methods, purrr, S4Vectors, shiny, shinyjs, tidyr, shinythemes System Requirements URL https://github.com/labbcb/GA4GHshiny Bug Reports https://github.com/labbcb/GA4GHshiny/issues See More Package Archives
Follow Installation instructions to use this package in your R session.
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