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Bioconductor - tRNA (development version)

tRNA

This is the development version of tRNA; for the stable release version, see tRNA.

Analyzing tRNA sequences and structures

Bioconductor version: Development (3.22)

The tRNA package allows tRNA sequences and structures to be accessed and used for subsetting. In addition, it provides visualization tools to compare feature parameters of multiple tRNA sets and correlate them to additional data. The tRNA package uses GRanges objects as inputs requiring only few additional column data sets.

Author: Felix GM Ernst [aut, cre] ORCID: 0000-0001-5064-0928

Maintainer: Felix GM Ernst <felix.gm.ernst at outlook.com>

Citation (from within R, enter citation("tRNA")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("tRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tRNA")
Details biocViews Software, Visualization Version 1.27.0 In Bioconductor since BioC 3.8 (R-3.5) (6.5 years) License GPL-3 + file LICENSE Depends R (>= 3.5), GenomicRanges, Structstrings Imports stringr, S4Vectors, methods, BiocGenerics, IRanges, XVector, Biostrings, Modstrings, ggplot2, scales System Requirements URL Bug Reports https://github.com/FelixErnst/tRNA/issues See More Package Archives

Follow Installation instructions to use this package in your R session.


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