This is the development version of shinyMethyl; for the stable release version, see shinyMethyl.
Interactive visualization for Illumina methylation arraysBioconductor version: Development (3.22)
Interactive tool for visualizing Illumina methylation array data. Both the 450k and EPIC array are supported.
Author: Jean-Philippe Fortin [cre, aut], Kasper Daniel Hansen [aut]
Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>
Citation (from within R, entercitation("shinyMethyl")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("shinyMethyl")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("shinyMethyl")
shinyMethyl: interactive visualization of Illumina 450K methylation arrays HTML R Script Reference Manual PDF NEWS Text Details biocViews DNAMethylation, MethylationArray, Microarray, Preprocessing, QualityControl, Software, TwoChannel Version 1.45.0 In Bioconductor since BioC 3.0 (R-3.1) (10.5 years) License Artistic-2.0 Depends Imports Biobase, BiocGenerics, graphics, grDevices, htmltools, MatrixGenerics, methods, minfi, RColorBrewer, shiny, stats, utils System Requirements URL https://github.com/Jfortin1/shinyMethyl Bug Reports https://github.com/Jfortin1/shinyMethyl See More Package Archives
Follow Installation instructions to use this package in your R session.
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