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Bioconductor - shiny.gosling (development version)

shiny.gosling

This is the development version of shiny.gosling; for the stable release version, see shiny.gosling.

A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization for R and Shiny

Bioconductor version: Development (3.22)

A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization. http://gosling-lang.org/. This R package is based on gosling.js. It uses R functions to create gosling plots that could be embedded onto R Shiny apps.

Author: Appsilon [aut, cre], Anirban Shaw [aut] ORCID: 0000-0003-4021-513X , Federico Rivadeneira [aut] ORCID: 0000-0001-7818-1225 , Vedha Viyash [aut]

Maintainer: Appsilon <opensource at appsilon.com>

Citation (from within R, enter citation("shiny.gosling")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("shiny.gosling")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("shiny.gosling")
Details biocViews Genetics, ShinyApps, Software, Visualization Version 1.5.0 In Bioconductor since BioC 3.19 (R-4.4) (1 year) License LGPL-3 Depends R (>= 4.1.0) Imports htmltools, jsonlite, rlang, shiny, shiny.react, fs, digest, rjson System Requirements URL See More Suggests config, covr, knitr, lintr, mockery (>= 0.4.3), rcmdcheck, rmarkdown, sessioninfo, spelling, testthat (>= 3.0.0), GenomicRanges, VariantAnnotation, StructuralVariantAnnotation, biovizBase, ggbio Linking To Enhances Depends On Me Imports Me gINTomics Suggests Me AlphaMissenseR Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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