This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This is the development version of qckitfastq; for the stable release version, see qckitfastq.
FASTQ Quality ControlBioconductor version: Development (3.22)
Assessment of FASTQ file format with multiple metrics including quality score, sequence content, overrepresented sequence and Kmers.
Author: Wenyue Xing [aut], August Guang [aut, cre]
Maintainer: August Guang <august.guang at gmail.com>
Citation (from within R, entercitation("qckitfastq")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("qckitfastq")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details biocViews QualityControl, Sequencing, Software Version 1.25.1 In Bioconductor since BioC 3.9 (R-3.6) (6 years) License Artistic-2.0 Depends Imports magrittr, ggplot2, dplyr, seqTools, zlibbioc, data.table, reshape2, grDevices, graphics, stats, utils, Rcpp, rlang, RSeqAn System Requirements GNU make URL See More Package ArchivesFollow Installation instructions to use this package in your R session.
Source Package Windows Binary (x86_64) macOS Binary (x86_64) macOS Binary (arm64) Source Repository git clone https://git.bioconductor.org/packages/qckitfastq Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/qckitfastq Package Short Url https://bioconductor.org/packages/qckitfastq/ Package Downloads Report Download StatsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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