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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/immunogenViewer.html below:

Bioconductor - immunogenViewer (development version)

immunogenViewer

This is the development version of immunogenViewer; for the stable release version, see immunogenViewer.

Visualization and evaluation of protein immunogens

Bioconductor version: Development (3.22)

Plots protein properties and visualizes position of peptide immunogens within protein sequence. Allows evaluation of immunogens based on structural and functional annotations to infer suitability for antibody-based methods aiming to detect native proteins.

Author: Katharina Waury [aut, cre] ORCID: 0000-0002-8570-7640

Maintainer: Katharina Waury <kathiwaury at gmail.com>

Citation (from within R, enter citation("immunogenViewer")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("immunogenViewer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("immunogenViewer")
Using immunogenViewer to evaluate and choose antibodies HTML R Script Reference Manual PDF Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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