This is the development version of goSorensen; for the stable release version, see goSorensen.
Statistical inference based on the Sorensen-Dice dissimilarity and the Gene Ontology (GO)Bioconductor version: Development (3.22)
This package implements inferential methods to compare gene lists in terms of their biological meaning as expressed in the GO. The compared gene lists are characterized by cross-tabulation frequency tables of enriched GO items. Dissimilarity between gene lists is evaluated using the Sorensen-Dice index. The fundamental guiding principle is that two gene lists are taken as similar if they share a great proportion of common enriched GO items.
Author: Pablo Flores [aut, cre] ORCID: 0000-0002-7156-8547 , Jordi Ocana [aut, ctb] (0000-0002-4736-699), Alexandre Sanchez-Pla [ctb] ORCID: 0000-0002-8673-7737 , Miquel Salicru [ctb] ORCID: 0000-0001-9644-5626
Maintainer: Pablo Flores <p_flores at espoch.edu.ec>
Citation (from within R, entercitation("goSorensen")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("goSorensen")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("goSorensen")Follow Installation instructions to use this package in your R session.
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