A RetroSearch Logo

Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Search Query:

Showing content from https://www.bioconductor.org/packages/devel/bioc/html/geyser.html below:

Bioconductor - geyser (development version)

geyser

This is the development version of geyser; for the stable release version, see geyser.

Gene Expression displaYer of SummarizedExperiment in R

Bioconductor version: Development (3.22)

Lightweight Expression displaYer (plotter / viewer) of SummarizedExperiment object in R. This package provides a quick and easy Shiny-based GUI to empower a user to use a SummarizedExperiment object to view (gene) expression grouped from the sample metadata columns (in the `colData` slot). Feature expression can either be viewed with a box plot or a heatmap.

Author: David McGaughey [aut, cre] ORCID: 0000-0002-9224-2888

Maintainer: David McGaughey <mcgaughey at gmail.com>

Citation (from within R, enter citation("geyser")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("geyser")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geyser")
Details biocViews GUI, GeneExpression, ShinyApps, Software Version 1.1.0 In Bioconductor since BioC 3.21 (R-4.5) (< 6 months) License CC0 Depends R (>= 3.5.0) Imports bslib (>= 0.6.0), BiocStyle, ComplexHeatmap, dplyr, DT, ggbeeswarm, ggplot2, htmltools, magrittr, shiny, SummarizedExperiment, tibble, tidyselect, tidyr System Requirements URL https://github.com/davemcg/geyser Bug Reports https://github.com/davemcg/geyser/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4