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Bioconductor - geneplotter (development version)

geneplotter

This is the development version of geneplotter; for the stable release version, see geneplotter.

Graphics related functions for Bioconductor

Bioconductor version: Development (3.22)

Functions for plotting genomic data

Author: Robert Gentleman [aut], Rohit Satyam [ctb] (Converted geneplotter vignette from Sweave to RMarkdown / HTML.), Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("geneplotter")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("geneplotter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneplotter")
Details biocViews Software, Visualization Version 1.87.0 In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20 years) License Artistic-2.0 Depends R (>= 2.10), methods, Biobase, BiocGenerics, lattice, annotate Imports AnnotationDbi, graphics, grDevices, grid, RColorBrewer, stats, utils System Requirements URL See More Suggests Rgraphviz, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db, BiocStyle, knitr Linking To Enhances Depends On Me HD2013SGI, Hiiragi2013, maEndToEnd Imports Me biocGraph, DEXSeq, MethylSeekR Suggests Me biocGraph, Category, EnrichmentBrowser, GOstats, Single.mTEC.Transcriptomes Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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