This is the development version of findIPs; for the stable release version, see findIPs.
Influential Points Detection for Feature RankingsBioconductor version: Development (3.22)
Feature rankings can be distorted by a single case in the context of high-dimensional data. The cases exerts abnormal influence on feature rankings are called influential points (IPs). The package aims at detecting IPs based on case deletion and quantifies their effects by measuring the rank changes (DOI:10.48550/arXiv.2303.10516). The package applies a novel rank comparing measure using the adaptive weights that stress the top-ranked important features and adjust the weights to ranking properties.
Author: Shuo Wang [aut, cre] ORCID: 0009-0000-0424-2160 , Junyan Lu [aut]
Maintainer: Shuo Wang <wangsures at foxmail.com>
Citation (from within R, entercitation("findIPs")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("findIPs")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("findIPs")
Details biocViews DifferentialExpression, GeneExpression, Regression, Software, Survival Version 1.5.0 In Bioconductor since BioC 3.19 (R-4.4) (1 year) License GPL-3 Depends graphics, R (>= 4.4.0) Imports Biobase, BiocParallel, parallel, stats, SummarizedExperiment, survival, utils System Requirements URL https://github.com/ShuoStat/findIPs Bug Reports https://github.com/ShuoStat/findIPs See More Package Archives
Follow Installation instructions to use this package in your R session.
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