This is the development version of ModCon; for the stable release version, see ModCon.
Modifying splice site usage by changing the mRNP code, while maintaining the genetic codeBioconductor version: Development (3.22)
Collection of functions to calculate a nucleotide sequence surrounding for splice donors sites to either activate or repress donor usage. The proposed alternative nucleotide sequence encodes the same amino acid and could be applied e.g. in reporter systems to silence or activate cryptic splice donor sites.
Author: Johannes Ptok [aut, cre] ORCID: 0000-0002-0322-5649
Maintainer: Johannes Ptok <Johannes.Ptok at posteo.de>
Citation (from within R, entercitation("ModCon")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ModCon")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ModCon")Follow Installation instructions to use this package in your R session.
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