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Bioconductor - MEAT (development version)

MEAT

This is the development version of MEAT; for the stable release version, see MEAT.

Muscle Epigenetic Age Test

Bioconductor version: Development (3.22)

This package estimates epigenetic age in skeletal muscle, using DNA methylation data generated with the Illumina Infinium technology (HM27, HM450 and HMEPIC).

Author: Sarah Voisin [aut, cre] ORCID: 0000-0002-4074-7083 , Steve Horvath [ctb] ORCID: 0000-0002-4110-3589

Maintainer: Sarah Voisin <sarah.voisin.aeris at gmail.com>

Citation (from within R, enter citation("MEAT")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MEAT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MEAT")
Details biocViews BiomedicalInformatics, DNAMethylation, Epigenetics, MethylationArray, Microarray, Normalization, Preprocessing, Software Version 1.21.0 In Bioconductor since BioC 3.11 (R-4.0) (5 years) License MIT + file LICENSE Depends R (>= 4.0) Imports impute(>= 1.58), dynamicTreeCut (>= 1.63), glmnet (>= 2.0), grDevices, graphics, stats, utils, stringr, tibble, RPMM (>= 1.25), minfi(>= 1.30), dplyr, SummarizedExperiment, wateRmelon System Requirements URL https://github.com/sarah-voisin/MEAT Bug Reports https://github.com/sarah-voisin/MEAT/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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