This is the development version of Lheuristic; for the stable release version, see Lheuristic.
Detection of scatterplots with L-shaped patternBioconductor version: Development (3.22)
The Lheuristic package identifies scatterpots that follow and L-shaped, negative distribution. It can be used to identify genes regulated by methylation by integration of an expression and a methylation array. The package uses two different methods to detect expression and methyaltion L- shapped scatterplots. The parameters can be changed to detect other scatterplot patterns.
Author: Sanchez Pla Alex [aut, cre] ORCID: 0000-0002-8673-7737 , Miro Cau Berta [aut] ORCID: 0000-0001-6049-8697
Maintainer: Sanchez Pla Alex <asanchez at ub.edu>
Citation (from within R, entercitation("Lheuristic")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Lheuristic")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Lheuristic")
Details biocViews DNAMethylation, MethylationArray, Software, StatisticalMethod Version 1.1.0 In Bioconductor since BioC 3.21 (R-4.5) (< 6 months) License MIT + file LICENSE Depends R (>= 4.4.0) Imports Hmisc, stats, energy, grDevices, graphics, utils, MultiAssayExperiment, ggplot2, ggpubr System Requirements URL https://github.com/ASPresearch/Lheuristic Bug Reports https://github.com/ASPresearch/Lheuristic/issues See More Package Archives
Follow Installation instructions to use this package in your R session.
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