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Bioconductor - IMMAN (development version)

IMMAN

This is the development version of IMMAN; for the stable release version, see IMMAN.

Interlog protein network reconstruction by Mapping and Mining ANalysis

Bioconductor version: Development (3.22)

Reconstructing Interlog Protein Network (IPN) integrated from several Protein protein Interaction Networks (PPINs). Using this package, overlaying different PPINs to mine conserved common networks between diverse species will be applicable.

Author: Minoo Ashtiani, Payman Nickchi, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari

Maintainer: Minoo Ashtiani <ashtiani.minoo at gmail.com>

Citation (from within R, enter citation("IMMAN")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("IMMAN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IMMAN")
Details biocViews Alignment, GraphAndNetwork, Network, Proteomics, SequenceMatching, Software, SystemsBiology Version 1.29.0 In Bioconductor since BioC 3.7 (R-3.5) (7 years) License Artistic-2.0 Depends Imports STRINGdb, pwalign, igraph, graphics, utils, seqinr System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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