This is the development version of wpm; for the stable release version, see wpm.
Well Plate MakerBioconductor version: Development (3.22)
The Well-Plate Maker (WPM) is a shiny application deployed as an R package. Functions for a command-line/script use are also available. The WPM allows users to generate well plate maps to carry out their experiments while improving the handling of batch effects. In particular, it helps controlling the "plate effect" thanks to its ability to randomize samples over multiple well plates. The algorithm for placing the samples is inspired by the backtracking algorithm: the samples are placed at random while respecting specific spatial constraints.
Author: Helene Borges [aut, cre], Thomas Burger [aut]
Maintainer: Helene Borges <borges.helene.sophie at gmail.com>
Citation (from within R, entercitation("wpm")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("wpm")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("wpm")Follow Installation instructions to use this package in your R session.
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