This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This is the development version of seqTools; for the stable release version, see seqTools.
Analysis of nucleotide, sequence and quality content on fastq filesBioconductor version: Development (3.22)
Analyze read length, phred scores and alphabet frequency and DNA k-mers on uncompressed and compressed fastq files.
Author: Wolfgang Kaisers
Maintainer: Wolfgang Kaisers <kaisers at med.uni-duesseldorf.de>
Citation (from within R, entercitation("seqTools")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("seqTools")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details biocViews QualityControl, Sequencing, Software Version 1.43.1 In Bioconductor since BioC 3.0 (R-3.1) (10.5 years) License Artistic-2.0 Depends methods, utils, zlibbioc Imports System Requirements URL See More Package ArchivesFollow Installation instructions to use this package in your R session.
Source Package Windows Binary (x86_64) macOS Binary (x86_64) macOS Binary (arm64) Source Repository git clone https://git.bioconductor.org/packages/seqTools Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/seqTools Package Short Url https://bioconductor.org/packages/seqTools/ Package Downloads Report Download StatsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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