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Bioconductor - scReClassify (development version)

This is the development version of scReClassify; for the stable release version, see scReClassify.

Bioconductor version: Development (3.22)

A post hoc cell type classification tool to fine-tune cell type annotations generated by any cell type classification procedure with semi-supervised learning algorithm AdaSampling technique. The current version of scReClassify supports Support Vector Machine and Random Forest as a base classifier.

Author: Pengyi Yang [aut] ORCID: 0000-0003-1098-3138 , Taiyun Kim [aut, cre] ORCID: 0000-0002-5028-836X

Maintainer: Taiyun Kim <taiyun.kim91 at gmail.com>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("scReClassify")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scReClassify")

Follow Installation instructions to use this package in your R session.

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