A RetroSearch Logo

Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Search Query:

Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../html/quantro.html below:

Bioconductor - quantro (development version)

quantro

This is the development version of quantro; for the stable release version, see quantro.

A test for when to use quantile normalization

Bioconductor version: Development (3.22)

A data-driven test for the assumptions of quantile normalization using raw data such as objects that inherit eSets (e.g. ExpressionSet, MethylSet). Group level information about each sample (such as Tumor / Normal status) must also be provided because the test assesses if there are global differences in the distributions between the user-defined groups.

Author: Stephanie Hicks [aut, cre] ORCID: 0000-0002-7858-0231 , Rafael Irizarry [aut] ORCID: 0000-0002-3944-4309

Maintainer: Stephanie Hicks <shicks19 at jhu.edu>

Citation (from within R, enter citation("quantro")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("quantro")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("quantro")
Details biocViews Microarray, MultipleComparison, Normalization, Preprocessing, Sequencing, Software Version 1.43.0 In Bioconductor since BioC 3.0 (R-3.1) (10.5 years) License GPL-3 Depends R (>= 4.0) Imports Biobase, minfi, doParallel, foreach, iterators, ggplot2, methods, RColorBrewer System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4