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Bioconductor - iASeq (development version)

iASeq

This is the development version of iASeq; for the stable release version, see iASeq.

iASeq: integrating multiple sequencing datasets for detecting allele-specific events

Bioconductor version: Development (3.22)

It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across studies.

Author: Yingying Wei, Hongkai Ji

Maintainer: Yingying Wei <ywei at jhsph.edu>

Citation (from within R, enter citation("iASeq")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("iASeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iASeq")
Details biocViews ChIPSeq, ImmunoOncology, RNASeq, SNP, Software Version 1.53.0 In Bioconductor since BioC 2.10 (R-2.15) (13.5 years) License GPL-2 Depends R (>= 2.14.1) Imports graphics, grDevices System Requirements URL See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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