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Bioconductor - flowCHIC (development version)

flowCHIC

This is the development version of flowCHIC; for the stable release version, see flowCHIC.

Analyze flow cytometric data using histogram information

Bioconductor version: Development (3.22)

A package to analyze flow cytometric data of complex microbial communities based on histogram images

Author: Joachim Schumann <joachim.schumann at ufz.de>, Christin Koch <christin.koch at ufz.de>, Ingo Fetzer <info.fetzer at stockholmresilience.su.se>, Susann Müller <susann.mueller at ufz.de>

Maintainer: Author: Joachim Schumann <joachim.schumann at ufz.de>

Citation (from within R, enter citation("flowCHIC")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("flowCHIC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowCHIC")
Analyze flow cytometric data using histogram information PDF R Script Reference Manual PDF Details biocViews CellBasedAssays, Clustering, FlowCytometry, ImmunoOncology, Software, Visualization Version 1.43.0 In Bioconductor since BioC 3.0 (R-3.1) (10.5 years) License GPL-2 Depends R (>= 3.1.0) Imports methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid System Requirements URL http://www.ufz.de/index.php?en=16773 See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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