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Bioconductor - fastLiquidAssociation (development version)

fastLiquidAssociation

This is the development version of fastLiquidAssociation; for the stable release version, see fastLiquidAssociation.

functions for genome-wide application of Liquid Association

Bioconductor version: Development (3.22)

This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.

Author: Tina Gunderson

Maintainer: Tina Gunderson <gunderson.tina at gmail.com>

Citation (from within R, enter citation("fastLiquidAssociation")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("fastLiquidAssociation")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("fastLiquidAssociation")
Details biocViews CellBiology, GeneExpression, Genetics, Pathways, Software Version 1.45.0 In Bioconductor since BioC 2.14 (R-3.1) (11 years) License GPL-2 Depends methods, LiquidAssociation, parallel, doParallel, stats, Hmisc, utils Imports WGCNA, impute, preprocessCore System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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