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Bioconductor - dagLogo (development version)

dagLogo

This is the development version of dagLogo; for the stable release version, see dagLogo.

dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory

Bioconductor version: Development (3.22)

Visualize significant conserved amino acid sequence pattern in groups based on probability theory.

Author: Jianhong Ou, Haibo Liu, Alexey Stukalov, Niraj Nirala, Usha Acharya, Lihua Julie Zhu

Maintainer: Jianhong Ou <jou at morgridge.org>

Citation (from within R, enter citation("dagLogo")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("dagLogo")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dagLogo")
Details biocViews SequenceMatching, Software, Visualization Version 1.47.0 In Bioconductor since BioC 2.13 (R-3.0) (11.5 years) License GPL (>=2) Depends R (>= 3.0.1), methods, grid Imports pheatmap, Biostrings, UniProt.ws, BiocGenerics, utils, biomaRt, motifStack, httr System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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