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Bioconductor - TnT (development version)

TnT

This is the development version of TnT; for the stable release version, see TnT.

Interactive Visualization for Genomic Features

Bioconductor version: Development (3.22)

A R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.

Author: Jialin Ma [cre, aut], Miguel Pignatelli [aut], Toby Hocking [aut]

Maintainer: Jialin Ma <marlin- at gmx.cn>

Citation (from within R, enter citation("TnT")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TnT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TnT")
Details biocViews Infrastructure, Software, Visualization Version 1.31.0 In Bioconductor since BioC 3.6 (R-3.4) (7.5 years) License AGPL-3 Depends R (>= 3.4), GenomicRanges Imports methods, stats, utils, grDevices, htmlwidgets, jsonlite, data.table, Biobase, GenomeInfoDb, IRanges, S4Vectors, knitr System Requirements URL https://github.com/Marlin-Na/TnT Bug Reports https://github.com/Marlin-Na/TnT/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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