This is the development version of RolDE; for the stable release version, see RolDE.
RolDE: Robust longitudinal Differential ExpressionBioconductor version: Development (3.22)
RolDE detects longitudinal differential expression between two conditions in noisy high-troughput data. Suitable even for data with a moderate amount of missing values.RolDE is a composite method, consisting of three independent modules with different approaches to detecting longitudinal differential expression. The combination of these diverse modules allows RolDE to robustly detect varying differences in longitudinal trends and expression levels in diverse data types and experimental settings.
Author: Tommi Valikangas [aut], Medical Bioinformatics Centre [cre]
Maintainer: Medical Bioinformatics Centre <mbc at utu.fi>
Citation (from within R, entercitation("RolDE")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("RolDE")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RolDE")Follow Installation instructions to use this package in your R session.
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