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Bioconductor - RTCA (development version)

RTCA

This is the development version of RTCA; for the stable release version, see RTCA.

Open-source toolkit to analyse data from xCELLigence System (RTCA)

Bioconductor version: Development (3.22)

Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.

Author: Jitao David Zhang

Maintainer: Jitao David Zhang <davidvonpku at gmail.com>

Citation (from within R, enter citation("RTCA")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RTCA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCA")
Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package PDF R Script RTCAtransformation: Discussion of transformation methods of RTCA data PDF R Script Reference Manual PDF Details biocViews CellBasedAssays, ImmunoOncology, Infrastructure, Software, TimeCourse, Visualization Version 1.61.0 In Bioconductor since BioC 2.5 (R-2.10) (15.5 years) License LGPL-3 Depends methods, stats, graphics, Biobase, RColorBrewer, gtools Imports System Requirements URL http://code.google.com/p/xcelligence/ http://www.xcelligence.roche.com/ http://www.nextbiomotif.com/Home/scientific-programming See More Suggests xtable Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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