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Bioconductor - RImmPort (development version)

RImmPort

This is the development version of RImmPort; for the stable release version, see RImmPort.

RImmPort: Enabling Ready-for-analysis Immunology Research Data

Bioconductor version: Development (3.22)

The RImmPort package simplifies access to ImmPort data for analysis in the R environment. It provides a standards-based interface to the ImmPort study data that is in a proprietary format.

Author: Ravi Shankar <rshankar at stanford.edu>

Maintainer: Zicheng Hu <Zicheng.Hu at ucsf.edu>, Ravi Shankar <rshankar at stanford.edu>

Citation (from within R, enter citation("RImmPort")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RImmPort")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RImmPort")
RImmPort: Enabling ready-for-analysis immunology research data PDF R Script RImmPort: Quick Start Guide PDF R Script Reference Manual PDF Details biocViews BiomedicalInformatics, DataImport, DataRepresentation, Software Version 1.37.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License GPL-3 Depends Imports plyr, dplyr, DBI, data.table, reshape2, methods, sqldf, tools, utils, RSQLite System Requirements URL http://bioconductor.org/packages/RImmPort/ See More Suggests knitr Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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