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Bioconductor - OpenStats (development version)

OpenStats

This is the development version of OpenStats; for the stable release version, see OpenStats.

A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association

Bioconductor version: Development (3.22)

Package contains several methods for statistical analysis of genotype to phenotype association in high-throughput screening pipelines.

Author: Hamed Haseli Mashhadi

Maintainer: Marina Kan <marinak at ebi.ac.uk>

Citation (from within R, enter citation("OpenStats")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("OpenStats")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OpenStats")
Details biocViews BatchEffect, Bayesian, Software, StatisticalMethod Version 1.21.0 In Bioconductor since BioC 3.11 (R-4.0) (5 years) License GPL (>= 2) Depends nlme Imports MASS, jsonlite, Hmisc, methods, knitr, AICcmodavg, car, rlist, summarytools, graphics, stats, utils System Requirements URL https://git.io/Jv5w0 Bug Reports https://git.io/Jv5wg See More Suggests rmarkdown Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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