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Bioconductor - MsDataHub (development version)

MsDataHub

This is the development version of MsDataHub; for the stable release version, see MsDataHub.

Mass Spectrometry Data on ExperimentHub

Bioconductor version: Development (3.22)

The MsDataHub package uses the ExperimentHub infrastructure to distribute raw mass spectrometry data files, peptide spectrum matches or quantitative data from proteomics and metabolomics experiments.

Author: Laurent Gatto [aut, cre] ORCID: 0000-0002-1520-2268 , Kristina Gomoryova [ctb] ORCID: 0000-0003-4407-3917 , Johannes Rainer [aut] ORCID: 0000-0002-6977-7147

Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>

Citation (from within R, enter citation("MsDataHub")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MsDataHub")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MsDataHub")
Details See More Suggests ExperimentHubData, DT, BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0), Spectra, mzR, PSMatch, QFeatures(>= 1.13.3) Linking To Enhances Depends On Me Imports Me Suggests Me msqrob2, QFeatures, scp Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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