This is the development version of MatrixGenerics; for the stable release version, see MatrixGenerics.
S4 Generic Summary Statistic Functions that Operate on Matrix-Like ObjectsBioconductor version: Development (3.22)
S4 generic functions modeled after the 'matrixStats' API for alternative matrix implementations. Packages with alternative matrix implementation can depend on this package and implement the generic functions that are defined here for a useful set of row and column summary statistics. Other package developers can import this package and handle a different matrix implementations without worrying about incompatibilities.
Author: Constantin Ahlmann-Eltze [aut] ORCID: 0000-0002-3762-068X , Peter Hickey [aut, cre] ORCID: 0000-0002-8153-6258 , Hervé Pagès [aut]
Maintainer: Peter Hickey <peter.hickey at gmail.com>
Citation (from within R, entercitation("MatrixGenerics")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MatrixGenerics")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details See More Suggests Matrix, sparseMatrixStats, SparseArray, DelayedArray, DelayedMatrixStats, SummarizedExperiment, testthat (>= 2.1.0) Linking To Enhances Depends On Me DelayedArray, DelayedMatrixStats, GenomicFiles, SparseArray, sparseMatrixStats, SummarizedExperiment, VariantAnnotation Imports Me atena, CoreGx, crisprDesign, CTexploreR, demuxSNP, DESeq2, dreamlet, escape, FLAMES, genefilter, glmGamPoi, imcRtools, lemur, lineagespot, methodical, mia, miaSim, miloR, MinimumDistance, MultiAssayExperiment, PDATK, RaggedExperiment, RAIDS, RCSL, saseR, scater, scFeatures, scone, scPCA, scran, scuttle, scviR, shinyMethyl, spatzie, StabMap, tadar, TENxIO, tLOH, tpSVG, transformGamPoi, universalmotif, VanillaICE, Voyager, zitools, homosapienDEE2CellScore, spatialLIBD, SCIntRuler Suggests Me bnem, cypress, MungeSumstats, scrapper Links To Me Build Report Build Report Package ArchivesFollow Installation instructions to use this package in your R session.
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