This is the development version of MODA; for the stable release version, see MODA.
MODA: MOdule Differential Analysis for weighted gene co-expression networkBioconductor version: Development (3.22)
MODA can be used to estimate and construct condition-specific gene co-expression networks, and identify differentially expressed subnetworks as conserved or condition specific modules which are potentially associated with relevant biological processes.
Author: Dong Li, James B. Brown, Luisa Orsini, Zhisong Pan, Guyu Hu and Shan He
Maintainer: Dong Li <dxl466 at cs.bham.ac.uk>
Citation (from within R, entercitation("MODA")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MODA")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MODA")
Details biocViews DifferentialExpression, GeneExpression, Microarray, Network, Software Version 1.35.0 In Bioconductor since BioC 3.4 (R-3.3) (8.5 years) License GPL (>= 2) Depends R (>= 3.3) Imports grDevices, graphics, stats, utils, WGCNA, dynamicTreeCut, igraph, cluster, AMOUNTAIN, RColorBrewer System Requirements URL See More Package Archives
Follow Installation instructions to use this package in your R session.
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