This is the development version of HERON; for the stable release version, see HERON.
Hierarchical Epitope pROtein biNdingBioconductor version: Development (3.22)
HERON is a software package for analyzing peptide binding array data. In addition to identifying significant binding probes, HERON also provides functions for finding epitopes (string of consecutive peptides within a protein). HERON also calculates significance on the probe, epitope, and protein level by employing meta p-value methods. HERON is designed for obtaining calls on the sample level and calculates fractions of hits for different conditions.
Author: Sean McIlwain [aut, cre] ORCID: 0000-0002-3820-8400 , Irene Ong [aut] ORCID: 0000-0002-9353-6941
Maintainer: Sean McIlwain <sean.mcilwain at wisc.edu>
Citation (from within R, entercitation("HERON")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("HERON")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HERON")Follow Installation instructions to use this package in your R session.
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