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Bioconductor - GenomicTuples (development version)

GenomicTuples

This is the development version of GenomicTuples; for the stable release version, see GenomicTuples.

Representation and Manipulation of Genomic Tuples

Bioconductor version: Development (3.22)

GenomicTuples defines general purpose containers for storing genomic tuples. It aims to provide functionality for tuples of genomic co-ordinates that are analogous to those available for genomic ranges in the GenomicRanges Bioconductor package.

Author: Peter Hickey [aut, cre], Marcin Cieslik [ctb], Hervé Pagès [ctb]

Maintainer: Peter Hickey <peter.hickey at gmail.com>

Citation (from within R, enter citation("GenomicTuples")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("GenomicTuples")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GenomicTuples")
Details biocViews DataRepresentation, Infrastructure, Sequencing, Software Version 1.43.1 In Bioconductor since BioC 3.0 (R-3.1) (10.5 years) License Artistic-2.0 Depends R (>= 4.0), GenomicRanges(>= 1.37.4), Seqinfo, S4Vectors(>= 0.17.25) Imports methods, BiocGenerics(>= 0.21.2), Rcpp (>= 0.11.2), IRanges(>= 2.19.13), data.table, stats4, stats, utils System Requirements URL www.github.com/PeteHaitch/GenomicTuples Bug Reports https://github.com/PeteHaitch/GenomicTuples/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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