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Bioconductor - GeneticsPed (development version)

GeneticsPed

This is the development version of GeneticsPed; for the stable release version, see GeneticsPed.

Pedigree and genetic relationship functions

Bioconductor version: Development (3.22)

Classes and methods for handling pedigree data. It also includes functions to calculate genetic relationship measures as relationship and inbreeding coefficients and other utilities. Note that package is not yet stable. Use it with care!

Author: Gregor Gorjanc and David A. Henderson <DNADavenator at GMail.Com>, with code contributions by Brian Kinghorn and Andrew Percy (see file COPYING)

Maintainer: David Henderson <DNADavenator at GMail.Com>

Citation (from within R, enter citation("GeneticsPed")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("GeneticsPed")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneticsPed")
Calculation of genetic relatedness/relationship between individuals in the pedigree PDF R Script Pedigree handling PDF R Script Quantitative genetic (animal) model example in R PDF R Script Reference Manual PDF NEWS Text LICENSE Text Details See More Suggests RUnit, gtools Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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