This is the development version of ExperimentSubset; for the stable release version, see ExperimentSubset.
Manages subsets of data with Bioconductor Experiment objectsBioconductor version: Development (3.22)
Experiment objects such as the SummarizedExperiment or SingleCellExperiment are data containers for one or more matrix-like assays along with the associated row and column data. Often only a subset of the original data is needed for down-stream analysis. For example, filtering out poor quality samples will require excluding some columns before analysis. The ExperimentSubset object is a container to efficiently manage different subsets of the same data without having to make separate objects for each new subset.
Author: Irzam Sarfraz [aut, cre] ORCID: 0000-0001-8121-792X , Muhammad Asif [aut, ths] ORCID: 0000-0003-1839-2527 , Joshua D. Campbell [aut] ORCID: 0000-0003-0780-8662
Maintainer: Irzam Sarfraz <irzam9095 at gmail.com>
Citation (from within R, entercitation("ExperimentSubset")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ExperimentSubset")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ExperimentSubset")Follow Installation instructions to use this package in your R session.
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