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Bioconductor - ComPrAn (development version)

ComPrAn

This is the development version of ComPrAn; for the stable release version, see ComPrAn.

Complexome Profiling Analysis package

Bioconductor version: Development (3.22)

This package is for analysis of SILAC labeled complexome profiling data. It uses peptide table in tab-delimited format as an input and produces ready-to-use tables and plots.

Author: Rick Scavetta [aut], Petra Palenikova [aut, cre] ORCID: 0000-0002-2465-4370

Maintainer: Petra Palenikova <palenikova3 at gmail.com>

Citation (from within R, enter citation("ComPrAn")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ComPrAn")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ComPrAn")
Details biocViews MassSpectrometry, Proteomics, Software, Visualization Version 1.17.0 In Bioconductor since BioC 3.13 (R-4.1) (4 years) License MIT + file LICENSE Depends Imports data.table, dplyr, forcats, ggplot2, magrittr, purrr, tidyr, rlang, stringr, shiny, DT, RColorBrewer, VennDiagram, rio, scales, shinydashboard, shinyjs, stats, tibble, grid System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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