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Bioconductor - BridgeDbR (development version)

BridgeDbR

This is the development version of BridgeDbR; for the stable release version, see BridgeDbR.

Code for using BridgeDb identifier mapping framework from within R

Bioconductor version: Development (3.22)

Use BridgeDb functions and load identifier mapping databases in R. It uses GitHub, Zenodo, and Figshare if you use this package to download identifier mappings files.

Author: Christ Leemans <christleemans at gmail.com>, Egon Willighagen <egon.willighagen at gmail.com>, Denise Slenter, Anwesha Bohler <anweshabohler at gmail.com>, Lars Eijssen <l.eijssen at maastrichtuniversity.nl>, Tooba Abbassi-Daloii

Maintainer: Egon Willighagen <egon.willighagen at gmail.com>

Citation (from within R, enter citation("BridgeDbR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BridgeDbR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BridgeDbR")
Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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