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Bioconductor - BayesKnockdown (development version)

BayesKnockdown

This is the development version of BayesKnockdown; for the stable release version, see BayesKnockdown.

BayesKnockdown: Posterior Probabilities for Edges from Knockdown Data

Bioconductor version: Development (3.22)

A simple, fast Bayesian method for computing posterior probabilities for relationships between a single predictor variable and multiple potential outcome variables, incorporating prior probabilities of relationships. In the context of knockdown experiments, the predictor variable is the knocked-down gene, while the other genes are potential targets. Can also be used for differential expression/2-class data.

Author: William Chad Young

Maintainer: William Chad Young <wmchad at uw.edu>

Citation (from within R, enter citation("BayesKnockdown")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BayesKnockdown")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BayesKnockdown")
Details See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.


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