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Bioconductor - AMOUNTAIN (development version)

This is the development version of AMOUNTAIN; for the stable release version, see AMOUNTAIN.

Bioconductor version: Development (3.22)

A pure data-driven gene network, weighted gene co-expression network (WGCN) could be constructed only from expression profile. Different layers in such networks may represent different time points, multiple conditions or various species. AMOUNTAIN aims to search active modules in multi-layer WGCN using a continuous optimization approach.

Author: Dong Li, Shan He, Zhisong Pan and Guyu Hu

Maintainer: Dong Li <dxl466 at cs.bham.ac.uk>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("AMOUNTAIN")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AMOUNTAIN")

Follow Installation instructions to use this package in your R session.

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