This is the development version of raerdata; for the stable release version, see raerdata.
A collection of datasets for use with raer packageBioconductor version: Development (3.22)
raerdata is an ExperimentHub package that provides a collection of files useful for demostrating functionality in the raer package. Datasets include 10x genomics scRNA-seq, bulk RNA-seq, and paired whole-genome and RNA-seq data. Additionally databases of human and mouse RNA editing sites are provided.
Author: Kent Riemondy [aut, cre] ORCID: 0000-0003-0750-1273
Maintainer: Kent Riemondy <kent.riemondy at cuanschutz.edu>
Citation (from within R, entercitation("raerdata")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("raerdata")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("raerdata")
Details biocViews ExperimentData, ExperimentHub, ExpressionData, PackageTypeData, RNASeqData, SequencingData, SingleCellData Version 1.7.0 License MIT + file LICENSE Depends Imports ExperimentHub, Rsamtools, BiocGenerics, rtracklayer, SingleCellExperiment System Requirements URL https://github.com/rnabioco/raerdata Bug Reports https://github.com/rnabioco/raerdata/issues See More Package Archives
Follow Installation instructions to use this package in your R session.
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