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Bioconductor - ccdata (development version)

ccdata

This is the development version of ccdata; for the stable release version, see ccdata.

Data for Combination Connectivity Mapping (ccmap) Package

Bioconductor version: Development (3.22)

This package contains microarray gene expression data generated from the Connectivity Map build 02 and LINCS l1000. The data are used by the ccmap package to find drugs and drug combinations to mimic or reverse a gene expression signature.

Author: Alex Pickering

Maintainer: Alex Pickering <alexvpickering at gmail.com>

Citation (from within R, enter citation("ccdata")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ccdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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