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Bioconductor - TENxPBMCData (development version)

TENxPBMCData

This is the development version of TENxPBMCData; for the stable release version, see TENxPBMCData.

PBMC data from 10X Genomics

Bioconductor version: Development (3.22)

Single-cell RNA-seq data for on PBMC cells, generated by 10X Genomics.

Author: Kasper D. Hansen [aut], Davide Risso [aut], Milan Malfait [ctb], Jeroen Gilis [ctb], Theodore Killian [ctb], Murat Cem Kose [ctb], Chong Tang [ctb], Teun van den Brand [ctb], Dania Machlab [ctb], Stephanie Hicks [aut, cre]

Maintainer: Stephanie Hicks <shicks19 at jhu.edu>

Citation (from within R, enter citation("TENxPBMCData")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TENxPBMCData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TENxPBMCData")
Obtaining scRNA-seq data on PBMCs from 10X Genomics HTML R Script Reference Manual PDF Details See More Suggests rmarkdown, knitr, BiocStyle, snow, BiocFileCache, BiocParallel Linking To Enhances Depends On Me OSCA.multisample, SingleRBook Imports Me Suggests Me adverSCarial, ASURAT, celda, concordexR, decontX, ExperimentSubset, glmGamPoi, iSEE, mbkmeans, schex, scone, scry, sketchR, transformGamPoi Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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