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Bioconductor - AssessORFData (development version)

AssessORFData

This is the development version of AssessORFData; for the stable release version, see AssessORFData.

Data and Files for the AssessORF Package

Bioconductor version: Development (3.22)

This package provides access to mapping and results objects generated by the AssessORF package, as well as the genome sequences for the strains corresponding to those objects.

Author: Deepank Korandla [aut], Nicholas Cooley [cre] ORCID: 0000-0002-6029-304X

Maintainer: Nicholas Cooley <npc19 at pitt.edu>

Citation (from within R, enter citation("AssessORFData")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("AssessORFData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AssessORFData")
Details biocViews Bacillus_subtilis_Data, Escherichia_coli_Data, ExperimentData, Genome, OrganismData, Proteome, Pseudomonas_aeruginosa_Data, SequencingData, Staphylococcus_aureus_Data Version 1.27.0 License GPL-3 Depends R (>= 3.5.0), RSQLite (>= 1.1) Imports DECIPHER, utils System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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