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Showing content from https://www.bioconductor.org/packages/devel/bioc/html/../../bioc/html/vtpnet.html below:

Bioconductor - vtpnet (development version)

vtpnet

This is the development version of vtpnet; for the stable release version, see vtpnet.

variant-transcription factor-phenotype networks

Bioconductor version: Development (3.22)

variant-transcription factor-phenotype networks, inspired by Maurano et al., Science (2012), PMID 22955828

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("vtpnet")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("vtpnet")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("vtpnet")
vtpnet: variant-transcription factor-network tools PDF R Script Reference Manual PDF Details See More Package Archives

Follow Installation instructions to use this package in your R session.

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