This is the development version of tweeDEseq; for the stable release version, see tweeDEseq.
RNA-seq data analysis using the Poisson-Tweedie family of distributionsBioconductor version: Development (3.22)
Differential expression analysis of RNA-seq using the Poisson-Tweedie (PT) family of distributions. PT distributions are described by a mean, a dispersion and a shape parameter and include Poisson and NB distributions, among others, as particular cases. An important feature of this family is that, while the Negative Binomial (NB) distribution only allows a quadratic mean-variance relationship, the PT distributions generalizes this relationship to any orde.
Author: Dolors Pelegri-Siso [aut, cre] ORCID: 0000-0002-5993-3003 , Juan R. Gonzalez [aut] ORCID: 0000-0003-3267-2146 , Mikel Esnaola [aut], Robert Castelo [aut]
Maintainer: Dolors Pelegri-Siso <dolors.pelegri at isglobal.org>
Citation (from within R, entercitation("tweeDEseq")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("tweeDEseq")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tweeDEseq")Follow Installation instructions to use this package in your R session.
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