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Bioconductor - rain (development version)

rain

This is the development version of rain; for the stable release version, see rain.

Rhythmicity Analysis Incorporating Non-parametric Methods

Bioconductor version: Development (3.22)

This package uses non-parametric methods to detect rhythms in time series. It deals with outliers, missing values and is optimized for time series comprising 10-100 measurements. As it does not assume expect any distinct waveform it is optimal or detecting oscillating behavior (e.g. circadian or cell cycle) in e.g. genome- or proteome-wide biological measurements such as: micro arrays, proteome mass spectrometry, or metabolome measurements.

Author: Paul F. Thaben, PÃ¥l O. Westermark

Maintainer: Paul F. Thaben <paul.thaben at charite.de>

Citation (from within R, enter citation("rain")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("rain")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rain")
Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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