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Bioconductor - multiMiR (development version)

multiMiR

This is the development version of multiMiR; for the stable release version, see multiMiR.

Integration of multiple microRNA-target databases with their disease and drug associations

Bioconductor version: Development (3.22)

A collection of microRNAs/targets from external resources, including validated microRNA-target databases (miRecords, miRTarBase and TarBase), predicted microRNA-target databases (DIANA-microT, ElMMo, MicroCosm, miRanda, miRDB, PicTar, PITA and TargetScan) and microRNA-disease/drug databases (miR2Disease, Pharmaco-miR VerSe and PhenomiR).

Author: Yuanbin Ru [aut], Matt Mulvahill [aut], Spencer Mahaffey [cre, aut], Katerina Kechris [aut, cph, ths]

Maintainer: Spencer Mahaffey <Spencer.Mahaffey at cuanschutz.edu>

Citation (from within R, enter citation("multiMiR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("multiMiR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("multiMiR")
Details biocViews Homo_sapiens_Data, Mus_musculus_Data, OrganismData, Rattus_norvegicus_Data, Software, miRNAData Version 1.31.0 In Bioconductor since BioC 3.6 (R-3.4) (7.5 years) License MIT + file LICENSE Depends R (>= 3.4) Imports stats, XML, RCurl, purrr (>= 0.2.2), tibble (>= 2.0), methods, BiocGenerics, AnnotationDbi, dplyr System Requirements URL https://github.com/KechrisLab/multiMiR Bug Reports https://github.com/KechrisLab/multiMiR/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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