This is the development version of igvShiny; for the stable release version, see igvShiny.
igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization and exploration integrated genomic data)Bioconductor version: Development (3.22)
This package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps.
Author: Paul Shannon [aut], Arkadiusz Gladki [aut, cre] ORCID: 0000-0002-7059-6378 , Karolina Scigocka [aut]
Maintainer: Arkadiusz Gladki <gladki.arkadiusz at gmail.com>
Citation (from within R, entercitation("igvShiny")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("igvShiny")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("igvShiny")Follow Installation instructions to use this package in your R session.
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