This is the development version of iSEEde; for the stable release version, see iSEEde.
iSEE extension for panels related to differential expression analysisBioconductor version: Development (3.22)
This package contains diverse functionality to extend the usage of the iSEE package, including additional classes for the panels or modes facilitating the analysis of differential expression results. This package does not perform differential expression. Instead, it provides methods to embed precomputed differential expression results in a SummarizedExperiment object, in a manner that is compatible with interactive visualisation in iSEE applications.
Author: Kevin Rue-Albrecht [aut, cre] ORCID: 0000-0003-3899-3872 , Thomas Sandmann [ctb] ORCID: 0000-0002-6601-8890 , Denali Therapeutics [fnd]
Maintainer: Kevin Rue-Albrecht <kevinrue67 at gmail.com>
Citation (from within R, entercitation("iSEEde")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("iSEEde")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("iSEEde")Follow Installation instructions to use this package in your R session.
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